Insertion junction: CLIP2.000261_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.000261
Chromosome:chromosome 2
Location:7349489
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g391801 VSP4 (1 of 8) PTHR11339:SF290 - PROTEIN T26A8.1; Hydroxyproline-rich cell wall glycoprotein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGAATTACCGAATACCCTACCTGACTTTACCCTCGCTGTGAACCTTGCAG
Internal bar code:TATAATGGGGTGCAACTGCGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:2702
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:100
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:100

Suggested primers for confirmation by PCR

Suggested primer 1:ACGCTCGCAGCATACTAGTC
Suggested primer 2:TGTTGCTGGCACAATCTTGC