Gene: Cre09.g391801

Overview

Common name:	VSP4
Defline:	(1 of 8) PTHR11339:SF290 - PROTEIN T26A8.1; Hydroxyproline-rich cell wall glycoprotein
Description:	Hydroxyproline rich glycoprotein VSP4; (SP)n-repeats, extracellular matrix protein (cell wall protein); resembles VSP6 [PMID: 7689882, Genbank entry AY036106]
Synonyms:	g9706.t1,Cre02.g127250.t1.2,Cre02.g127250.t1.1,VSP4
Chromosome:	chromosome 2 (genome version v6.1), chromosome 9 (genome version v5.5)

Protein Localization

We did not create a plasmid for this gene.

Protein-Protein Interactions

We did not determine any protein-protein interactions for this gene.

Mutant Strains

Insertion Junction	Mutant Strain	Insertion Junction Feature	Confidence (%)	Genome Version
CLIP2.000261_1	CLIP2.000261	intron	80	6.1
CLIP2.000261_2	CLIP2.000261	intron	80	6.1
CLIP2.021021_1	CLIP2.021021	CDS	80	6.1
CLIP2.021021_2	CLIP2.021021	CDS	80	6.1
CLIP2.021286_1	CLIP2.021286	CDS	80	6.1
CLIP2.021286_2	CLIP2.021286	CDS	80	6.1
CLIP2.034547_1	CLIP2.034547	CDS	80	6.1
CLIP2.034547_2	CLIP2.034547	CDS	80	6.1
CLIP2.034870_1	CLIP2.034870	CDS	80	6.1
CLIP2.034870_2	CLIP2.034870	CDS	80	6.1
CLIP2.040951_1	CLIP2.040951	CDS	80	6.1
CLIP2.040951_2	CLIP2.040951	CDS	80	6.1
CLIP2.051634_1	CLIP2.051634	CDS	80	6.1
CLIP2.076635_1	CLIP2.076635	5'UTR	80	6.1
CLIP2.077821_1	CLIP2.077821	5'UTR	40	6.1
LMJ.RY0402.053096_1	LMJ.RY0402.053096	CDS	73	5.5
LMJ.RY0402.076245_1	LMJ.RY0402.076245	3'UTR	95	5.5
LMJ.RY0402.076245_2	LMJ.RY0402.076245	3'UTR	95	5.5
LMJ.RY0402.077850_1	LMJ.RY0402.077850	intron	95	5.5
LMJ.RY0402.077850_2	LMJ.RY0402.077850	intron	95	5.5
LMJ.RY0402.079341_2	LMJ.RY0402.079341	5'UTR	73	5.5
LMJ.RY0402.087076_1	LMJ.RY0402.087076	intron	95	5.5
LMJ.RY0402.087076_2	LMJ.RY0402.087076	intron	95	5.5
LMJ.RY0402.093001_1	LMJ.RY0402.093001	CDS	73	5.5
LMJ.RY0402.096799_2	LMJ.RY0402.096799	intron	73	5.5
LMJ.RY0402.129350_1	LMJ.RY0402.129350	5'UTR	95	5.5
LMJ.RY0402.129350_2	LMJ.RY0402.129350	5'UTR	95	5.5
LMJ.RY0402.139156_1	LMJ.RY0402.139156	intron	73	5.5
LMJ.RY0402.141820_2	LMJ.RY0402.141820	CDS	73	5.5
LMJ.RY0402.142008_1	LMJ.RY0402.142008	3'UTR	95	5.5
LMJ.RY0402.142008_2	LMJ.RY0402.142008	3'UTR	95	5.5
LMJ.RY0402.142008_3	LMJ.RY0402.142008	3'UTR	95	5.5
LMJ.RY0402.162294_1	LMJ.RY0402.162294	3'UTR	58	5.5
LMJ.RY0402.176992_1	LMJ.RY0402.176992	intron	95	5.5
LMJ.RY0402.176992_2	LMJ.RY0402.176992	intron	95	5.5
LMJ.RY0402.183424_1	LMJ.RY0402.183424	5'UTR	95	5.5
LMJ.RY0402.183424_2	LMJ.RY0402.183424	5'UTR	95	5.5
LMJ.RY0402.223853_1	LMJ.RY0402.223853	intron	95	5.5
LMJ.RY0402.223853_2	LMJ.RY0402.223853	CDS	95	5.5
LMJ.RY0402.239404_2	LMJ.RY0402.239404	intron	58	5.5
LMJ.RY0402.255112_1	LMJ.RY0402.255112	3'UTR	95	5.5
LMJ.RY0402.255112_2	LMJ.RY0402.255112	3'UTR	95	5.5

Gene Annotations

PFAM:	PF05572
PANTHER:	PTHR11339 PTHR11339:SF290
KEGG_ec:
KEGG_orthology:
KOG:
Gene ontology terms::
Best arabidopsis TAIR name:
Best arabidopsis TAIR symbol:
Best arabidopsis TAIR defline:
Phytozome Locus Page

Phenotypes

Our phenotype screens did not find statistically significant results for this gene.