Insertion junction: CLIP2.021286_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.021286
Chromosome:chromosome 2
Location:7350272
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g391801 VSP4 (1 of 8) PTHR11339:SF290 - PROTEIN T26A8.1; Hydroxyproline-rich cell wall glycoprotein CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGGTATGGAAGGCCGGATTGAGGATGGCGTTCTGGTCATAGTACGACTG
Internal bar code:TCCATGTTTTTATTGTTTTATC

Confirmation - LEAP-Seq

LEAP-Seq distance:2274
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:50
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:50

Suggested primers for confirmation by PCR

Suggested primer 1:ACTAGTATGCTGCGAGCGTC
Suggested primer 2:TCTGCAGCCCGCTTTTGATA