Insertion junction: LMJ.RY0402.255112_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.255112
Chromosome:chromosome_9
Location:3832074
Confidence (%):95
Locus systematic id Locus common name Defline Orientation Feature
Cre09.g391801 VSP4 Hydroxyproline-rich glycoprotein, cell wall protein antisense 3'UTR

Insertion site details

Flanking sequence (orientation from cassette outwards):GATCTACAGCAAGAGCGCTTGCGCACTGGG
Internal bar code:GTCGACGAGTTGGCCCGAATA

Confirmation - LEAP-Seq

LEAP-Seq distance:581
LEAP-Seq percent confirming:99.5857
LEAP-Seq n confirming:1202
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:TCAGGTTCCCTCACAAATCC
Suggested primer 2:GAGAAGAAGGGCAACTGGTG