Insertion junction: LMJ.RY0402.087076_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.087076
Chromosome:chromosome 9
Location:3828183
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre09.g391801 VSP4 (1 of 8) PTHR11339:SF290 - PROTEIN T26A8.1; Hydroxyproline-rich cell wall glycoprotein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAAAAAACGACTTTGTCAGCCCGCGTTGGC
Internal bar code:ATCTGCCCATCAAATATCCCCA

Confirmation - LEAP-Seq

LEAP-Seq distance:782
LEAP-Seq percent confirming:98.9784
LEAP-Seq n confirming:2519
LEAP-Seq n nonconfirming:26
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:TGTCCATCGACGACAAACAT
Suggested primer 2:GTCCAGCAAAAAGAATCCCA