Insertion junction: CLIP2.034547_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.034547
Chromosome:chromosome 2
Location:7350741
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g391801 VSP4 (1 of 8) PTHR11339:SF290 - PROTEIN T26A8.1; Hydroxyproline-rich cell wall glycoprotein CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGAAGTCCGGCGAAATCTGTGGACATGTTCAGGAGCGCCGGGGACTGGT
Internal bar code:GCAAAGGGAATCACGTCAATTC

Confirmation - LEAP-Seq

LEAP-Seq distance:3226
LEAP-Seq percent confirming:99.1071
LEAP-Seq n confirming:111
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:112

Suggested primers for confirmation by PCR

Suggested primer 1:ACTAGTATGCTGCGAGCGTC
Suggested primer 2:GAGCATGACGTGGAAGACCA