Insertion junction: LMJ.RY0402.162294_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.162294
Chromosome:chromosome 9
Location:3832644
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre09.g391801 VSP4 (1 of 8) PTHR11339:SF290 - PROTEIN T26A8.1; Hydroxyproline-rich cell wall glycoprotein 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCATCCCTTAAGTGTCGGTGTGGCCTAGC
Internal bar code:CCACACACGACCGGCCGTGCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:305
LEAP-Seq percent confirming:99.6032
LEAP-Seq n confirming:251
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:CCCTACAACAAGCAGTGCAA
Suggested primer 2:GTGCATGTTGGTTGATACGC