Insertion junction: LMJ.RY0402.139156_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.139156
Chromosome:chromosome 9
Location:3828896
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre09.g391801 VSP4 (1 of 8) PTHR11339:SF290 - PROTEIN T26A8.1; Hydroxyproline-rich cell wall glycoprotein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGCACTTGATTGCTTGGGAGATGAAGAGA
Internal bar code:CGGAGGACTCTTCTATGGGCTC

Confirmation - LEAP-Seq

LEAP-Seq distance:889
LEAP-Seq percent confirming:99.7146
LEAP-Seq n confirming:4193
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:GCTGAAAATGGGTGTCAGGT
Suggested primer 2:CAAGCAACCCGCTCTTCTAC