Insertion junction: CLIP2.051634_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.051634
Chromosome:chromosome 2
Location:7351063
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g391801 VSP4 (1 of 8) PTHR11339:SF290 - PROTEIN T26A8.1; Hydroxyproline-rich cell wall glycoprotein CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTCATCACGACGCCCATGCTGTCCACCTGCTGCGCCAGGTCCTTAATGG
Internal bar code:TGGTTGTAATTTTGAAAAGACA

Confirmation - LEAP-Seq

LEAP-Seq distance:2349
LEAP-Seq percent confirming:97.2973
LEAP-Seq n confirming:36
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:37

Suggested primers for confirmation by PCR

Suggested primer 1:ACGGGATGTGTGCATGACAT
Suggested primer 2:TGGGCTTGATGCTGTACTGG