Insertion junction: LMJ.RY0402.093001_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.093001
Chromosome:chromosome 9
Location:3829311
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre09.g391801 VSP4 (1 of 8) PTHR11339:SF290 - PROTEIN T26A8.1; Hydroxyproline-rich cell wall glycoprotein CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGGATATAGTTGAAGATATCCACGAGACC
Internal bar code:TGTGGGTCCGCTGTTGTCACCC

Confirmation - LEAP-Seq

LEAP-Seq distance:483
LEAP-Seq percent confirming:99.1639
LEAP-Seq n confirming:1779
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:CGGTATCGGTCACACAGATG
Suggested primer 2:CGAGTAGAGCATGACGTGGA