Insertion junction: LMJ.RY0402.077850_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.077850
Chromosome:chromosome 9
Location:3828528
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre09.g391801 VSP4 (1 of 8) PTHR11339:SF290 - PROTEIN T26A8.1; Hydroxyproline-rich cell wall glycoprotein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GATCTCTTGTCGACAGCCGAGATAGCTTGT
Internal bar code:ACTCGGCGTTGGGTCTTCGTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1103
LEAP-Seq percent confirming:99.3842
LEAP-Seq n confirming:807
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:CACGAGACCGGTGGTAATCT
Suggested primer 2:GTTTCCTTCTCAGCCAGCAC