Insertion junction: LMJ.RY0402.076245_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.076245
Chromosome:chromosome 9
Location:3832861
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre09.g391801 VSP4 (1 of 8) PTHR11339:SF290 - PROTEIN T26A8.1; Hydroxyproline-rich cell wall glycoprotein 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGTCCCTCGTTTCACACGGCAGAAGCTCT
Internal bar code:AAGATAAGGACGTCGCTATCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1123
LEAP-Seq percent confirming:99.8002
LEAP-Seq n confirming:1998
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:CGTTGTTGCTATTTCCCGTT
Suggested primer 2:GTGCATGTTGGTTGATACGC