Insertion junction: LMJ.RY0402.223853_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.223853
Chromosome:chromosome 9
Location:3829139
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre09.g391801 VSP4 (1 of 8) PTHR11339:SF290 - PROTEIN T26A8.1; Hydroxyproline-rich cell wall glycoprotein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCAACCCCATAGCACGTCAGCCCCTGCAC
Internal bar code:GTCTGTGGGGAAAGAGTATAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:688
LEAP-Seq percent confirming:97.1081
LEAP-Seq n confirming:1276
LEAP-Seq n nonconfirming:38
LEAP-Seq n unique pos:42

Suggested primers for confirmation by PCR

Suggested primer 1:CGAGTAGAGCATGACGTGGA
Suggested primer 2:CGGTATCGGTCACACAGATG