Insertion junction: CLIP2.000289_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.000289
Chromosome:chromosome 3
Location:1135572
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g148950 CGL43,SRRP1,PNT1 Ortholog of PSII biogenesis protein SRRP1; (1 of 3) IPR003029//IPR012340//IPR022967 - S1 domain // Nucleic acid-binding, OB-fold // RNA-binding domain, S1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTTAAGCTATGGTATTCACGGCTGAAGTCTGGGTTATGGGCAGCATCCG
Internal bar code:GAAGGATCAATGTGTCGGGGCC

Confirmation - LEAP-Seq

LEAP-Seq distance:2348
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:GGCAGAGTTGTCACAGACGA
Suggested primer 2:ATCTGCTGGCCAATGAGCTT