Gene: Cre03.g148950

Overview

Common name:CGL43,SRRP1,PNT1
Defline:Ortholog of PSII biogenesis protein SRRP1; (1 of 3) IPR003029//IPR012340//IPR022967 - S1 domain // Nucleic acid-binding, OB-fold // RNA-binding domain, S1
Description:chloroplast RNA binding protein with S1 domain; Conserved in the Green Lineage; Arabidopsis homolog binds psbA mRNA
Synonyms:Cre03.g148950.t1.1,PNT1,CGL43,g3029.t1
Chromosome:chromosome 3

Protein Localization

A plasmid for expressing Cre03.g148950 tagged with the fluorescent protein Venus and affinity epitope 3xFLAG is available: pLM005-Cre03.g148950-Venus-3xFLAG

Imaged strain: CSI_LW07C11

Imaging conditions: Tris-Phosphate media, air, 150 uM photons/m2/s, shaking in 96-well plate; imaged after 16 hours.

Classification(s):

chloroplast/homogeneous/not pyrenoid depleted

cytosol/cytosol (weak signal)

If you reference these protein localization data in a manuscript, please cite: Wang et al. 2023.

VenusChlorophyllBright fieldMerged

Protein-Protein Interactions

We did not determine any protein-protein interactions for this gene.

Mutant Strains

Insertion Junction Mutant Strain Insertion Junction Feature Confidence (%) Genome Version
CLIP2.000081_1 CLIP2.000081 5'UTR 80 6.1
CLIP2.000081_2 CLIP2.000081 5'UTR 80 6.1
CLIP2.000192_1 CLIP2.000192 3'UTR 80 6.1
CLIP2.000192_2 CLIP2.000192 3'UTR 80 6.1
CLIP2.000289_1 CLIP2.000289 intron 80 6.1
CLIP2.000289_2 CLIP2.000289 intron 80 6.1
CLIP2.000346_1 CLIP2.000346 intron 80 6.1
CLIP2.000346_2 CLIP2.000346 intron 80 6.1
CLIP2.000779_1 CLIP2.000779 5'UTR 80 6.1
CLIP2.000779_2 CLIP2.000779 5'UTR 80 6.1
CLIP2.000916_1 CLIP2.000916 5'UTR 80 6.1
LMJ.RY0402.043382_1 LMJ.RY0402.043382 CDS 95 5.5
LMJ.RY0402.043382_2 LMJ.RY0402.043382 CDS 95 5.5
LMJ.RY0402.070467_1 LMJ.RY0402.070467 3'UTR 58 5.5
LMJ.RY0402.074484_1 LMJ.RY0402.074484 intron 73 5.5
LMJ.RY0402.122642_1 LMJ.RY0402.122642 intron 73 5.5
LMJ.RY0402.123896_1 LMJ.RY0402.123896 5'UTR 73 5.5
LMJ.RY0402.154547_1 LMJ.RY0402.154547 intron 73 5.5
LMJ.RY0402.202744_1 LMJ.RY0402.202744 intron 73 5.5
LMJ.RY0402.203884_1 LMJ.RY0402.203884 3'UTR 95 5.5
LMJ.RY0402.203884_2 LMJ.RY0402.203884 3'UTR 95 5.5
LMJ.SG0182.012419_1 LMJ.SG0182.012419 intron 75 5.3

Gene Annotations

PFAM:PF00575
PANTHER: PTHR23270
KEGG_ec:
KEGG_orthology:
KOG:
Gene ontology terms::GO:0003676
Best arabidopsis TAIR name:AT3G23700
Best arabidopsis TAIR symbol:
Best arabidopsis TAIR defline:Nucleic acid-binding proteins superfamily
Phytozome Locus Page

Phenotypes

Our phenotype screens did not find statistically significant results for this gene.