Insertion junction: LMJ.RY0402.043382_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.043382
Chromosome:chromosome 3
Location:1119924
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre03.g148950 CGL43,SRRP1,PNT1 Ortholog of PSII biogenesis protein SRRP1; (1 of 3) IPR003029//IPR012340//IPR022967 - S1 domain // Nucleic acid-binding, OB-fold // RNA-binding domain, S1 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCCTGGATGGTCTGGACTGGGAGTCAGCT
Internal bar code:CTGGTAGACCTTTGAGGGGCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:850
LEAP-Seq percent confirming:99.4209
LEAP-Seq n confirming:2232
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:TGTTTGGCTCGATAGTGCTG
Suggested primer 2:TTCATGAGGAGAACGCAGTG