Insertion junction: LMJ.RY0402.043382_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.043382
Chromosome:chromosome 3
Location:1119923
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre03.g148950 CGL43,SRRP1,PNT1 Ortholog of PSII biogenesis protein SRRP1; (1 of 3) IPR003029//IPR012340//IPR022967 - S1 domain // Nucleic acid-binding, OB-fold // RNA-binding domain, S1 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCTGCGGGAGGGCACACACAGCGACGGCC
Internal bar code:TATGGAATGATTGTGGTGGGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:712
LEAP-Seq percent confirming:99.6602
LEAP-Seq n confirming:9384
LEAP-Seq n nonconfirming:32
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:TGTTTGGCTCGATAGTGCTG
Suggested primer 2:TTCATGAGGAGAACGCAGTG