Insertion junction: CLIP2.000779_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.000779
Chromosome:chromosome 3
Location:1133882
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g148900 FMO5 Flavin-containing monooxygenase; (1 of 3) K00485 - dimethylaniline monooxygenase (N-oxide forming) (FMO) CDS
Cre03.g148950 CGL43,SRRP1,PNT1 Ortholog of PSII biogenesis protein SRRP1; (1 of 3) IPR003029//IPR012340//IPR022967 - S1 domain // Nucleic acid-binding, OB-fold // RNA-binding domain, S1 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCCTCGTTGAGCTCCAAAACCAGCACGTTGCAGCCCAGCTTTAGGAATT
Internal bar code:CGGCACTTAACTGCCGTGCCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2125
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:CTGCGCCCTCCTGTACTAAC
Suggested primer 2:CATAGCTGAACAGGCCCCAA