Insertion junction: CLIP2.000301_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.000301
Chromosome:chromosome 8
Location:1085590
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g362450 AMYA2,AMA2 Alpha-amylase 2; (1 of 1) PTHR10357//PTHR10357:SF118 - ALPHA-AMYLASE // ALPHA-AMYLASE 2-RELATED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGCGTAGGACGCTGGAGGTACTTCGTGGTATAATGGCTGCGAAGTGCGT
Internal bar code:TGAGAATCAATAAAATGGGAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2536
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:ACAACCCAATGCCTCTCTCG
Suggested primer 2:CCGCAGCATCTACCAATTGC