Gene: Cre08.g362450
Overview
| Common name: | AMYA2,AMA2 |
| Defline: | Alpha-amylase 2; (1 of 1) PTHR10357//PTHR10357:SF118 - ALPHA-AMYLASE // ALPHA-AMYLASE 2-RELATED |
| Description: | Belongs to glycoside hydrolase family 13; catalyses hydrolysis of (1-4)-alpha-D-glucosidic linkages in polysaccharides so as to remove successive alpha-maltose residues from the non-reducing ends of the chains in the conversion of starch to maltose |
| Synonyms: | AMA2,g8488.t1,Cre08.g362450.t1.1,AMYA2 |
| Chromosome: | chromosome 8 |
Protein Localization
A plasmid for expressing Cre08.g362450 tagged with the fluorescent protein Venus and affinity epitope 3xFLAG is available: pLM005-Cre08.g362450-Venus-3xFLAG
Imaged strain: CSI_LW07H9
Imaging conditions: Tris-Phosphate media, air, 150 uM photons/m2/s, shaking in 96-well plate; imaged after 16 hours.
Classification(s):
nucleus/nuclear envelope
If you reference these protein localization data in a manuscript, please cite: Wang et al. 2023.
 |  |  |  |
| Venus | Chlorophyll | Bright field | Merged |
Protein-Protein Interactions
| Bait ID | Bait Name | Prey ID | Prey Name | Reference |
|---|---|---|---|---|
| Cre08.g362450 | AMYA2,AMA2 | Cre08.g362450 | AMYA2,AMA2 | Wang et al. 2023 |
| Cre08.g362450 | AMYA2,AMA2 | Cre16.g670100 | Wang et al. 2023 |
Mutant Strains
| Insertion Junction | Mutant Strain | Insertion Junction Feature | Confidence (%) | Genome Version |
|---|---|---|---|---|
| CLIP2.000301_1 | CLIP2.000301 | 3'UTR | 80 | 6.1 |
| CLIP2.000301_2 | CLIP2.000301 | 3'UTR | 80 | 6.1 |
| CLIP2.000455_1 | CLIP2.000455 | 5'UTR_intron | 80 | 6.1 |
| CLIP2.000455_2 | CLIP2.000455 | 5'UTR_intron | 80 | 6.1 |
| CLIP2.001011_1 | CLIP2.001011 | CDS | 80 | 6.1 |
| CLIP2.001053_1 | CLIP2.001053 | intron | 80 | 6.1 |
| LMJ.RY0402.127331_1 | LMJ.RY0402.127331 | CDS | 73 | 5.5 |
Gene Annotations
| PFAM: | PF00128, PF07821 |
| PANTHER: | PTHR10357 PTHR10357:SF118 |
| KEGG_ec: | EC:3.2.1.1 |
| KEGG_orthology: | K01176 |
| KOG: | KOG0471 |
| Gene ontology terms:: | GO:0003824, GO:0004556, GO:0005509, GO:0005975, GO:0008152, GO:0016597, GO:0043169 |
| Best arabidopsis TAIR name: | AT1G76130 |
| Best arabidopsis TAIR symbol: | AMY3,ATAMY3 |
| Best arabidopsis TAIR defline: | alpha-amylase-like 2 |
| Phytozome Locus Page |
Phenotypes
Our phenotype screens did not find statistically significant results for this gene.