Insertion junction: LMJ.RY0402.127331_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.127331
Chromosome:chromosome 8
Location:1103815
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre08.g362450 AMYA2,AMA2 Alpha-amylase 2; (1 of 1) PTHR10357//PTHR10357:SF118 - ALPHA-AMYLASE // ALPHA-AMYLASE 2-RELATED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTTGCGCAAGTCCCCCGACTGCAGAGACG
Internal bar code:CTAGGATACTTAGCCACCCTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:562
LEAP-Seq percent confirming:99.9275
LEAP-Seq n confirming:1379
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:TACGATATCCGTCCAGCTCC
Suggested primer 2:ACAGACAGGATGTGCTCACG