Insertion junction: CLIP2.001053_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.001053
Chromosome:chromosome 8
Location:1084136
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g362450 AMYA2,AMA2 Alpha-amylase 2; (1 of 1) PTHR10357//PTHR10357:SF118 - ALPHA-AMYLASE // ALPHA-AMYLASE 2-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATGCAGCCAGCCAAGTCGTCTCGCCGCAACGTAGCATTACGCTCCTCTT
Internal bar code:CGGCCCTGAGACTACTCGCTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1055
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:GCGTCAGGGAAGGTGTGTTA
Suggested primer 2:CCTTGTTTGTGGCGATGCAA