Insertion junction: CLIP2.000310_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.000310
Chromosome:chromosome 17
Location:3095643
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g720450 intron
lncRNA_TCONS_00164973 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGTGGTCCGCTTGTGACCCTGTGTTGCTGCGCGCAGGAGGAGAACACCA
Internal bar code:TTGCTGGACTGATGATATTTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:3090
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:GCGCGGCTAACACACATTAG
Suggested primer 2:GTGCGCTTTGTGTGACTGAG