Insertion junction: CLIP2.000310_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.000310
Chromosome:chromosome 17
Location:3095645
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g720450 intron
lncRNA_TCONS_00164973 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGGAACCAGCCAGCCAGGTTTCCACCGCACTGCTGACCGCTCTCGCGCA
Internal bar code:GGTGGTAATTGAGGTGGGCGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:5319
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:109
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:109

Suggested primers for confirmation by PCR

Suggested primer 1:GTGCGCTTTGTGTGACTGAG
Suggested primer 2:GCGCGGCTAACACACATTAG