Insertion junction: CLIP2.000332_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.000332
Chromosome:chromosome 10
Location:2569309
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g436550 LCI5,EPYC1 Essential pyrenoid component 1 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTGAATCTGTGCGCGCCGGCCGGCAAGCTTAAGTGCAAGCTGCCCGCGG
Internal bar code:ACGTAAATGTGCGCGTGCCAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:3497
LEAP-Seq percent confirming:96.1538
LEAP-Seq n confirming:50
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:52

Suggested primers for confirmation by PCR

Suggested primer 1:GTGAAGGGTTCCGCAAAACC
Suggested primer 2:CGCTTTAAGCTGGACCCAGA