Insertion junction: CLIP2.000351_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.000351
Chromosome:chromosome 11
Location:1373372
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467712 SAGA1 StArch Granules Abnormal 1; (1 of 3) IPR000104//IPR002044//IPR013784 - Antifreeze protein, type I // Carbohydrate binding module family 20 // Carbohydrate-binding-like fold intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCACGTCCTGCTCATTCCCGCAACTTGTGTTTCTTTGCTGGGAACCGTGT
Internal bar code:CGGGAGGGTACACTACTGGAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:255
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:GACAGTACGACAACGGGGTT
Suggested primer 2:AAGGGAGATAGGGACAGCGT