Insertion junction: CLIP2.000400_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.000400
Chromosome:chromosome 10
Location:4772305
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g452800 LCIB1,PMP1,LCIB Low-CO2-inducible protein B CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGACCGGCATGAAGGCCGGCCTGTCCCACTCGCCCGTGTGCAACGTGAG
Internal bar code:ATGCGCGCGTGAGTTATGCTAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1020
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:TACTCCAGGTCGTCGGTGAT
Suggested primer 2:AAGCGGCATATGGGTGTGAA