Insertion junction: CLIP2.000406_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.000406
Chromosome:chromosome 9
Location:2154613
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g395700 (1 of 5) PTHR18640//PTHR18640:SF9 - FAMILY NOT NAMED // SODIUM/METABOLITE COTRANSPORTER BASS4, CHLOROPLASTIC-RELATED; Sodium:bile acid symporter CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTGCTGTGCGGCTGGACCCCGTGCCGCTGCTGGTGCAGCTGGTGCAGTG
Internal bar code:AATTGTCGATCAGTGTCTCGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:2158
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:AGCACGGCAATCCAATACCA
Suggested primer 2:ACCGACATACCCAACACACC