Gene: Cre09.g395700
Overview
| Common name: | |
| Defline: | (1 of 5) PTHR18640//PTHR18640:SF9 - FAMILY NOT NAMED // SODIUM/METABOLITE COTRANSPORTER BASS4, CHLOROPLASTIC-RELATED; Sodium:bile acid symporter |
| Description: | |
| Synonyms: | g9375.t1 |
| Chromosome: | chromosome 9 |
Protein Localization
A plasmid for expressing Cre09.g395700 tagged with the fluorescent protein Venus and affinity epitope 3xFLAG is available: pLM005-Cre09.g395700-Venus-3xFLAG
Imaged strain: CSI_LW05G5
Imaging conditions: Tris-Phosphate media, air, 150 uM photons/m2/s, shaking in 96-well plate; imaged after 16 hours.
Classification(s):
chloroplast/homogeneous/pyrenoid depleted
shapes in cytoplasm/uncategorized shapes in cytoplasm
If you reference these protein localization data in a manuscript, please cite: Wang et al. 2023.
 |  |  |  |
| Venus | Chlorophyll | Bright field | Merged |
Protein-Protein Interactions
We did not determine any protein-protein interactions for this gene.
Mutant Strains
| Insertion Junction | Mutant Strain | Insertion Junction Feature | Confidence (%) | Genome Version |
|---|---|---|---|---|
| CLIP2.000176_1 | CLIP2.000176 | CDS | 80 | 6.1 |
| CLIP2.000176_2 | CLIP2.000176 | CDS | 80 | 6.1 |
| CLIP2.000392_1 | CLIP2.000392 | intron | 80 | 6.1 |
| CLIP2.000392_2 | CLIP2.000392 | intron | 80 | 6.1 |
| CLIP2.000406_1 | CLIP2.000406 | CDS | 80 | 6.1 |
| CLIP2.000406_2 | CLIP2.000406 | CDS | 80 | 6.1 |
| CLIP2.000933_3 | CLIP2.000933 | intron | 80 | 6.1 |
| CLIP2.000933_4 | CLIP2.000933 | intron | 80 | 6.1 |
| CLIP2.000959_1 | CLIP2.000959 | CDS | 80 | 6.1 |
| CLIP2.000959_2 | CLIP2.000959 | CDS | 80 | 6.1 |
| LMJ.RY0402.087664_1 | LMJ.RY0402.087664 | CDS | 95 | 5.5 |
| LMJ.RY0402.087664_2 | LMJ.RY0402.087664 | CDS | 95 | 5.5 |
| LMJ.RY0402.126383_1 | LMJ.RY0402.126383 | CDS | 73 | 5.5 |
| LMJ.RY0402.137904_4 | LMJ.RY0402.137904 | CDS | 58 | 5.5 |
| LMJ.RY0402.143678_2 | LMJ.RY0402.143678 | 3'UTR | 95 | 5.5 |
| LMJ.RY0402.143678_3 | LMJ.RY0402.143678 | 3'UTR | 95 | 5.5 |
| LMJ.RY0402.167384_1 | LMJ.RY0402.167384 | intron | 73 | 5.5 |
| LMJ.RY0402.184244_1 | LMJ.RY0402.184244 | CDS | 73 | 5.5 |
| LMJ.RY0402.218392_1 | LMJ.RY0402.218392 | intron | 95 | 5.5 |
| LMJ.RY0402.218392_2 | LMJ.RY0402.218392 | intron | 95 | 5.5 |
Gene Annotations
| PFAM: | PF01758 |
| PANTHER: | PTHR18640 PTHR18640:SF9 |
| KEGG_ec: | |
| KEGG_orthology: | |
| KOG: | |
| Gene ontology terms:: | GO:0016020 |
| Best arabidopsis TAIR name: | AT3G56160 |
| Best arabidopsis TAIR symbol: | |
| Best arabidopsis TAIR defline: | Sodium Bile acid symporter family |
| Phytozome Locus Page |
Phenotypes
Our phenotype screens did not find statistically significant results for this gene.