Insertion junction: CLIP2.000959_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.000959
Chromosome:chromosome 9
Location:2153054
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g395700 (1 of 5) PTHR18640//PTHR18640:SF9 - FAMILY NOT NAMED // SODIUM/METABOLITE COTRANSPORTER BASS4, CHLOROPLASTIC-RELATED; Sodium:bile acid symporter CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GACACCAGTGCGAAGTCCACACACGTCTGCGCCAGGTGACTGAACACAGC
Internal bar code:GATACAGTCTACGAGGCAGAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1627
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:ATACTATTGAGGTGCCGGCG
Suggested primer 2:CACAGCGAGACACAAGTCCT