Insertion junction: CLIP2.000933_3

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.000933
Chromosome:chromosome 9
Location:2156173
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g395700 (1 of 5) PTHR18640//PTHR18640:SF9 - FAMILY NOT NAMED // SODIUM/METABOLITE COTRANSPORTER BASS4, CHLOROPLASTIC-RELATED; Sodium:bile acid symporter intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACACACACACAGGGAGTCATGCTGCGGCAGGGCGAGGCGAAGAAGGCGC
Internal bar code:AGCTGTAATCCTAAGCATAAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:4827
LEAP-Seq percent confirming:97.9167
LEAP-Seq n confirming:47
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:48

Suggested primers for confirmation by PCR

Suggested primer 1:GCGTGATGAGGAGGATGGAG
Suggested primer 2:ACTAACGTGTCTGCGTGTGT