Insertion junction: CLIP2.000409_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.000409
Chromosome:chromosome 3
Location:1911480
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g155001 ISA1,STA7 (1 of 1) PTHR10357:SF169 - ISOAMYLASE 1, CHLOROPLASTIC; Isoamylase, starch debranching enzyme 1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGCCGTCAGCTCCCACACCGCCATGTCCGGGACCGCAGGCCCTCCACAC
Internal bar code:CTTAGTGGAACATGTTAGTCAA

Confirmation - LEAP-Seq

LEAP-Seq distance:2239
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:CTCAGTGTTCAGCTCCTCCG
Suggested primer 2:TGTTACACCCAGCCCGTTAC