Insertion junction: CLIP2.000409_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.000409
Chromosome:chromosome 3
Location:1911480
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g155001 ISA1,STA7 (1 of 1) PTHR10357:SF169 - ISOAMYLASE 1, CHLOROPLASTIC; Isoamylase, starch debranching enzyme 1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGAGGGGGCAGGCGCACGCGGGGCGGGTGGGGGGCAGGGGCAGGGGCGG
Internal bar code:CTTAGTGGAACATGTTAGTCAA

Confirmation - LEAP-Seq

LEAP-Seq distance:196
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:TGTTACACCCAGCCCGTTAC
Suggested primer 2:CTCAGTGTTCAGCTCCTCCG