Insertion junction: CLIP2.000421_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.000421
Chromosome:chromosome 12
Location:6636242
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g539100 HEL57 (1 of 1) K14811 - ATP-dependent RNA helicase DBP3 [EC:3.6.4.13] (DBP3); DEAD box RNA helicase 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAAAAGGCCATCAGACTGACCATCTCGACCATCGCCGCCGGCGTTCGTAT
Internal bar code:ATAACGTACTGAACTCTGCGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:76
LEAP-Seq percent confirming:4.34783
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:22
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:ACGGTTCGCTAGCACAGAAA
Suggested primer 2:TGATGGTGGTGATGGTGGTG