| Common name: | HEL57 |
| Defline: | (1 of 1) K14811 - ATP-dependent RNA helicase DBP3 [EC:3.6.4.13] (DBP3); DEAD box RNA helicase |
| Description: | Most similar to At1g3197; contains stretches of 1 and 9 His residues |
| Synonyms: | HEL57,g13254.t1 |
| Chromosome: | chromosome 12 |
We did not create a plasmid for this gene.
We did not determine any protein-protein interactions for this gene.
| Insertion Junction | Mutant Strain | Insertion Junction Feature | Confidence (%) | Genome Version |
|---|---|---|---|---|
| CLIP2.000421_1 | CLIP2.000421 | 5'UTR | 80 | 6.1 |
| CLIP2.000421_2 | CLIP2.000421 | 5'UTR | 80 | 6.1 |
| CLIP2.000922_1 | CLIP2.000922 | intron | 80 | 6.1 |
| CLIP2.000922_2 | CLIP2.000922 | intron | 80 | 6.1 |
| LMJ.RY0402.105384_1 | LMJ.RY0402.105384 | CDS | 73 | 5.5 |
| LMJ.RY0402.118668_1 | LMJ.RY0402.118668 | CDS | 95 | 5.5 |
| LMJ.RY0402.118668_2 | LMJ.RY0402.118668 | CDS | 95 | 5.5 |
| LMJ.RY0402.139769_1 | LMJ.RY0402.139769 | CDS | 73 | 5.5 |
| LMJ.RY0402.145937_2 | LMJ.RY0402.145937 | CDS | 73 | 5.5 |
| LMJ.RY0402.173811_1 | LMJ.RY0402.173811 | CDS | 73 | 5.5 |
| LMJ.RY0402.196887_1 | LMJ.RY0402.196887 | CDS | 73 | 5.5 |
| LMJ.RY0402.217471_3 | LMJ.RY0402.217471 | CDS | 73 | 5.5 |
| PFAM: | PF00270, PF00271 |
| PANTHER: | PTHR24031 PTHR24031:SF320 |
| KEGG_ec: | EC:3.6.4.13 |
| KEGG_orthology: | K14811 |
| KOG: | KOG0331 |
| Gene ontology terms:: | GO:0003676, GO:0005524 |
| Best arabidopsis TAIR name: | AT1G31970 |
| Best arabidopsis TAIR symbol: | STRS1 |
| Best arabidopsis TAIR defline: | DEA(D/H)-box RNA helicase family protein |
| Phytozome Locus Page |
Mutants in this gene exhibit a phenotype under the following conditions:
| Caffeine, screen 2 of 2 ( 77% confidence (FDR = 0.23)) |
| Carbon concentrating mechanism, screen 1 of 11 ( 97% confidence (FDR = 0.028)) |
| Carbon concentrating mechanism, screen 2 of 11 ( 83% confidence (FDR = 0.17)) |
Note: FDR indicates the likelihood that a particular genotype-phenotype relationship is incorrect. Not all mutants in a particular gene show the same phenotype. Please see the mutant pages for each mutant's phenotypes. Complementation is needed to definitively prove a genotype-phenotype link. These data are from a pooled phenotyping experiment.
If you reference the phenotypic data above in a manuscript, please cite: Fauser et al. 2022 Nature Genetics.