Insertion junction: CLIP2.000462_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.000462
Chromosome:chromosome 6
Location:2964504
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g273700 HCF136 (1 of 1) PTHR32010//PTHR32010:SF6 - FAMILY NOT NAMED // PHOTOSYSTEM II STABILITY/ASSEMBLY FACTOR HCF136, CHLOROPLASTIC; Photosystem II stability/assembly factor HCF136 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCTGGTGCAGGACTGGACGACGGACGTGGGGTCTTCTTGTGTGTTGTTC
Internal bar code:TACAGCTTATGAAGCTACTTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:3961
LEAP-Seq percent confirming:98.5507
LEAP-Seq n confirming:68
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:69

Suggested primers for confirmation by PCR

Suggested primer 1:TCCTGGTGAATTCGTGAGCC
Suggested primer 2:GAACAACACGCCAACCTGAC