Insertion junction: CLIP2.000467_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.000467
Chromosome:chromosome 11
Location:1370120
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467712 SAGA1 StArch Granules Abnormal 1; (1 of 3) IPR000104//IPR002044//IPR013784 - Antifreeze protein, type I // Carbohydrate binding module family 20 // Carbohydrate-binding-like fold CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGGCGGAGCCGCCGCCGCCGCCGCCGGCACCGCCGGCTGCAGCGGCGGC
Internal bar code:AGCGCGGGCCATATGGGATGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:2534
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:ACCTGGTTTCAAACAGCCCA
Suggested primer 2:GAATGGGTTAATGCGCGGTC