Insertion junction: CLIP2.000520_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.000520
Chromosome:chromosome 10
Location:4936165
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g453900 CYN71 (1 of 1) K12736 - peptidylprolyl isomerase domain and WD repeat-containing protein 1 [EC:5.2.1.8] (PPWD1); Cyclophilin 71 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATACTGGAGACGCGCATGCCAATGCACGTGTTTCGTCTGACCAGGGCACG
Internal bar code:CCACGGGTCGTGTGCTGGATCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1395
LEAP-Seq percent confirming:94.7368
LEAP-Seq n confirming:36
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:38

Suggested primers for confirmation by PCR

Suggested primer 1:TTCCGAGTTCTCCACCTTGC
Suggested primer 2:TGTTTTGTCTGGGGGCCTTT