Gene: Cre10.g453900

Overview

Common name:CYN71
Defline:(1 of 1) K12736 - peptidylprolyl isomerase domain and WD repeat-containing protein 1 [EC:5.2.1.8] (PPWD1); Cyclophilin 71
Description:Peptidyl-prolyl cis-trans isomerase (rotamase), cyclophilin type; similar to AtCYP71; null-allele mutant was isolated (PMID 29743196)
Synonyms:g11146.t1,Cre10.g453900.t1.1
Chromosome:chromosome 10

Protein Localization

We did not create a plasmid for this gene.

Protein-Protein Interactions

We did not determine any protein-protein interactions for this gene.

Mutant Strains

Insertion Junction Mutant Strain Insertion Junction Feature Confidence (%) Genome Version
CLIP2.000347_1 CLIP2.000347 intron 80 6.1
CLIP2.000347_2 CLIP2.000347 intron 80 6.1
CLIP2.000519_1 CLIP2.000519 intron 80 6.1
CLIP2.000519_2 CLIP2.000519 intron 80 6.1
CLIP2.000520_1 CLIP2.000520 intron 80 6.1
CLIP2.000520_2 CLIP2.000520 intron 80 6.1
CLIP2.000645_1 CLIP2.000645 intron 80 6.1
CLIP2.000645_2 CLIP2.000645 intron 80 6.1
CLIP2.000819_1 CLIP2.000819 CDS 80 6.1
CLIP2.000819_2 CLIP2.000819 CDS 80 6.1
CLIP2.000839_1 CLIP2.000839 intron 80 6.1
CLIP2.043267_1 CLIP2.043267 intron 63 6.1
LMJ.RY0402.048656_2 LMJ.RY0402.048656 intron 73 5.5
LMJ.RY0402.050166_2 LMJ.RY0402.050166 intron 95 5.5
LMJ.RY0402.050166_3 LMJ.RY0402.050166 intron 95 5.5
LMJ.RY0402.092899_1 LMJ.RY0402.092899 intron 95 5.5
LMJ.RY0402.092899_2 LMJ.RY0402.092899 intron 95 5.5
LMJ.RY0402.136684_1 LMJ.RY0402.136684 CDS 95 5.5
LMJ.RY0402.136684_2 LMJ.RY0402.136684 CDS 95 5.5
LMJ.RY0402.153279_1 LMJ.RY0402.153279 intron 73 5.5
LMJ.RY0402.162797_1 LMJ.RY0402.162797 intron 73 5.5
LMJ.RY0402.187982_1 LMJ.RY0402.187982 CDS 95 5.5
LMJ.RY0402.187982_2 LMJ.RY0402.187982 CDS 95 5.5

Gene Annotations

PFAM:PF00160, PF00400
PANTHER: PTHR11071 PTHR11071:SF213
KEGG_ec:EC:5.2.1.8
KEGG_orthology:K12736
KOG:KOG0882
Gene ontology terms::GO:0000413, GO:0003755, GO:0005515, GO:0006457
Best arabidopsis TAIR name:AT3G44600
Best arabidopsis TAIR symbol:CYP71
Best arabidopsis TAIR defline:cyclophilin71
Phytozome Locus Page

Phenotypes

Mutants in this gene exhibit a phenotype under the following conditions:

Carbon concentrating mechanism, screen 4 of 11 ( 80% confidence (FDR = 0.2))
Carbon concentrating mechanism, screen 5 of 11 ( 93% confidence (FDR = 0.067))
Limited growth in liquid media, screen 1 of 4 ( 94% confidence (FDR = 0.054))
Limited growth in liquid media, screen 2 of 4 ( 99% confidence (FDR = 0.0002))
Limited growth in liquid media, screen 3 of 4 ( 79% confidence (FDR = 0.21))
Photosynthesis or light sensitivity, screen 2 of 12 ( 99% confidence (FDR = 0.0052))
Photosynthesis or light sensitivity, screen 4 of 12 ( 98% confidence (FDR = 0.014))
Photosynthesis or light sensitivity, screen 8 of 12 ( 99% confidence (FDR = 3.3e-05))
Photosynthesis or light sensitivity, screen 10 of 12 ( 99% confidence (FDR = 4.2e-05))
Photosynthesis or light sensitivity, screen 11 of 12 ( 99% confidence (FDR = 1.5e-06))

Note: FDR indicates the likelihood that a particular genotype-phenotype relationship is incorrect. Not all mutants in a particular gene show the same phenotype. Please see the mutant pages for each mutant's phenotypes. Complementation is needed to definitively prove a genotype-phenotype link. These data are from a pooled phenotyping experiment.

If you reference the phenotypic data above in a manuscript, please cite: Fauser et al. 2022 Nature Genetics.