Insertion junction: CLIP2.000625_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.000625
Chromosome:chromosome 16
Location:2810961
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g662600 BST1,LCI11,LCI11C (1 of 10) PF01062 - Bestrophin, RFP-TM, chloride channel (Bestrophin); Bestrophin 1 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCCAACCAAACGGTAAACCGTCTACCTCGATCGCAATGATTTACAGTTT
Internal bar code:GCCTTATGGACTGAAATACTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:3267
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:69
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:69

Suggested primers for confirmation by PCR

Suggested primer 1:CAATCGCCTACATCCGACGA
Suggested primer 2:CATGCAAGTCATCACGCGAG