Gene: Cre16.g662600
Overview
| Common name: | BST1,LCI11,LCI11C |
| Defline: | (1 of 10) PF01062 - Bestrophin, RFP-TM, chloride channel (Bestrophin); Bestrophin 1 |
| Description: | Thylakoid membrane protein with 4 transmembrane helices, probably pentameric; present in pyrenoid-traversing thylakoids; induction by Low-CO2 is cia5-dependent; RNAi mutants show growth defects under low CO2; similar to Bestrophin, RFP-TM, a ubiquitous chloride channel; similar to Arabidopsis AT3G61320 and AT2G45870; part of a small multigene family; very similar to closely linked BST2 and BST3 |
| Synonyms: | g15998.t1,Cre16.g662600.t1.1,LCI11C,LCI11 |
| Chromosome: | chromosome 16 |
Protein Localization
The plasmid for this gene is not available.
Imaged strain: CSI_FC1B05
Imaging conditions: Tris-Phosphate media, air, 150 uM photons/m2/s, shaking in 96-well plate; imaged after 48 hours.
Classification(s):
chloroplast/homogeneous/pyrenoid depleted
If you reference these protein localization data in a manuscript, please cite: Mackinder et al. 2017.
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| Venus Venus+Chlorophyll |
Protein-Protein Interactions
| Bait ID | Bait Name | Prey ID | Prey Name | Reference |
|---|---|---|---|---|
| Cre16.g662600 | BST1,LCI11,LCI11C | Cre01.g014000 | Mackinder et al. 2017 | |
| Cre16.g662600 | BST1,LCI11,LCI11C | Cre01.g027550 | Mackinder et al. 2017 | |
| Cre16.g662600 | BST1,LCI11,LCI11C | Cre02.g111450 | TEF4 | Mackinder et al. 2017 |
| Cre16.g662600 | BST1,LCI11,LCI11C | Cre06.g250650 | EZY8,DRP4A,DRP4 | Mackinder et al. 2017 |
| Cre16.g662600 | BST1,LCI11,LCI11C | Cre06.g257850 | PBCP1,PBCP,PPP21 | Mackinder et al. 2017 |
| Cre16.g662600 | BST1,LCI11,LCI11C | Cre06.g260450 | LCI20 | Mackinder et al. 2017 |
| Cre16.g662600 | BST1,LCI11,LCI11C | Cre06.g280650 | CGL59,Y3IP1 | Mackinder et al. 2017 |
| Cre16.g662600 | BST1,LCI11,LCI11C | Cre06.g307500 | LCIC,LCIC1 | Mackinder et al. 2017 |
| Cre16.g662600 | BST1,LCI11,LCI11C | Cre07.g314150 | ZDS,ZDS1 | Mackinder et al. 2017 |
| Cre16.g662600 | BST1,LCI11,LCI11C | Cre07.g328250 | Mackinder et al. 2017 | |
| Cre16.g662600 | BST1,LCI11,LCI11C | Cre07.g339750 | HEM2,FeC,FEC1,HEMH,HEM15 | Mackinder et al. 2017 |
| Cre16.g662600 | BST1,LCI11,LCI11C | Cre09.g396300 | PPX1,PPOX | Mackinder et al. 2017 |
| Cre16.g662600 | BST1,LCI11,LCI11C | Cre09.g400997 | Mackinder et al. 2017 | |
| Cre16.g662600 | BST1,LCI11,LCI11C | Cre11.g477950 | Mackinder et al. 2017 | |
| Cre16.g662600 | BST1,LCI11,LCI11C | Cre12.g509650 | PDS1,PDS | Mackinder et al. 2017 |
| Cre16.g662600 | BST1,LCI11,LCI11C | Cre12.g524300 | CGL71,PYG7 | Mackinder et al. 2017 |
| Cre16.g662600 | BST1,LCI11,LCI11C | Cre13.g566650 | LCS2 | Mackinder et al. 2017 |
| Cre16.g662600 | BST1,LCI11,LCI11C | Cre16.g662600 | BST1,LCI11,LCI11C | Mackinder et al. 2017 |
| Cre16.g662600 | BST1,LCI11,LCI11C | Cre16.g663400 | LCI11A,BST2,LCI11 | Mackinder et al. 2017 |
| Cre16.g662600 | BST1,LCI11,LCI11C | Cre16.g663450 | LCI11B,BST3,LCI11 | Mackinder et al. 2017 |
| Cre16.g662600 | BST1,LCI11,LCI11C | Cre16.g687450 | CPLD54 | Mackinder et al. 2017 |
| Cre16.g662600 | BST1,LCI11,LCI11C | Cre19.g750547 | NDA2 | Mackinder et al. 2017 |
Mutant Strains
| Insertion Junction | Mutant Strain | Insertion Junction Feature | Confidence (%) | Genome Version |
|---|---|---|---|---|
| CLIP2.000625_1 | CLIP2.000625 | 3'UTR | 80 | 6.1 |
| CLIP2.000625_2 | CLIP2.000625 | 3'UTR | 80 | 6.1 |
| CLIP2.000874_1 | CLIP2.000874 | 3'UTR | 80 | 6.1 |
| CLIP2.000874_2 | CLIP2.000874 | 3'UTR | 80 | 6.1 |
| CLIP2.001006_1 | CLIP2.001006 | intron | 80 | 6.1 |
| CLIP2.001006_2 | CLIP2.001006 | intron | 80 | 6.1 |
| LMJ.RY0402.143186_2 | LMJ.RY0402.143186 | 3'UTR | 73 | 5.5 |
Gene Annotations
| PFAM: | PF01062 |
| PANTHER: | PTHR33281 PTHR33281:SF1 |
| KEGG_ec: | |
| KEGG_orthology: | |
| KOG: | |
| Gene ontology terms:: | |
| Best arabidopsis TAIR name: | AT3G61320 |
| Best arabidopsis TAIR symbol: | |
| Best arabidopsis TAIR defline: | Bestrophin-like protein |
| Phytozome Locus Page |
Phenotypes
Our phenotype screens did not find statistically significant results for this gene.