Gene: Cre06.g260450

Overview

Common name:LCI20
Defline:Putative 2-oxoglutarate/malate translocator; (1 of 1) K03319 - divalent anion:Na+ symporter, DASS family (TC.DASS)
Description:possibly chloroplast-located dicarboxylate transporter, homologous to AtDCT1/2 [PMID:7873543]; Low-CO2 Inducible gene revealed by cDNA array analyses; regulated by CCM1 [PMID: 15235119]; conserved in green lineage
Synonyms:Cre06.g260450.t1.1,g5853.t1
Chromosome:chromosome 6

Protein Localization

The plasmid for this gene is not available.

Imaged strain: CSI_FC1G02

Imaging conditions: Tris-Phosphate media, air, 150 uM photons/m2/s, shaking in 96-well plate; imaged after 48 hours.

Classification(s):

chloroplast/homogeneous/not pyrenoid depleted

If you reference these protein localization data in a manuscript, please cite: Mackinder et al. 2017.

Venus                      Venus+Chlorophyll

Protein-Protein Interactions

Bait ID Bait Name Prey ID Prey Name Reference
Cre06.g283750 HST1 Cre06.g260450 LCI20 Mackinder et al. 2017
Cre06.g309000 NAR1B,LCIA Cre06.g260450 LCI20 Mackinder et al. 2017
Cre16.g662600 BST1,LCI11,LCI11C Cre06.g260450 LCI20 Mackinder et al. 2017

Mutant Strains

Insertion Junction Mutant Strain Insertion Junction Feature Confidence (%) Genome Version
CLIP2.001700_1 CLIP2.001700 intron 80 6.1
CLIP2.001700_2 CLIP2.001700 intron 80 6.1
CLIP2.002563_1 CLIP2.002563 intron 80 6.1
CLIP2.002563_2 CLIP2.002563 intron 80 6.1
CLIP2.003030_1 CLIP2.003030 outside_mRNA 80 6.1
CLIP2.003030_2 CLIP2.003030 outside_mRNA 80 6.1
CLIP2.003998_1 CLIP2.003998 intron 80 6.1
CLIP2.003998_2 CLIP2.003998 intron 80 6.1
CLIP2.004438_1 CLIP2.004438 CDS 80 6.1
CLIP2.005891_1 CLIP2.005891 intron 80 6.1
CLIP2.005891_2 CLIP2.005891 intron 80 6.1
LMJ.RY0402.091704_1 LMJ.RY0402.091704 CDS 73 5.5
LMJ.RY0402.113857_1 LMJ.RY0402.113857 5'UTR 58 5.5
LMJ.RY0402.154417_1 LMJ.RY0402.154417 3'UTR 73 5.5
LMJ.RY0402.196583_1 LMJ.RY0402.196583 5'UTR 73 5.5
LMJ.RY0402.199846_2 LMJ.RY0402.199846 5'UTR 73 5.5
LMJ.RY0402.205944_1 LMJ.RY0402.205944 intron 73 5.5
LMJ.RY0402.211496_1 LMJ.RY0402.211496 3'UTR 73 5.5
LMJ.RY0402.232127_1 LMJ.RY0402.232127 5'UTR 73 5.5
LMJ.RY0402.253781_1 LMJ.RY0402.253781 3'UTR 73 5.5

Gene Annotations

PFAM:PF03600
PANTHER: PTHR10283 PTHR10283:SF13
KEGG_ec:
KEGG_orthology:K03319
KOG:
Gene ontology terms::GO:0005215, GO:0006814, GO:0016020, GO:0016021, GO:0055085
Best arabidopsis TAIR name:AT5G64290
Best arabidopsis TAIR symbol:DCT,DIT2.1
Best arabidopsis TAIR defline:dicarboxylate transport 2.1
Phytozome Locus Page

Phenotypes

Our phenotype screens did not find statistically significant results for this gene.