Insertion junction: CLIP2.001006_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.001006
Chromosome:chromosome 16
Location:2812200
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g662600 BST1,LCI11,LCI11C (1 of 10) PF01062 - Bestrophin, RFP-TM, chloride channel (Bestrophin); Bestrophin 1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGACTCACCCGAAGGGCTCCTCGCACTGCACGCCAATCTCCTCAATGCC
Internal bar code:CCTTTAAAACACAAGCTGGGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2986
LEAP-Seq percent confirming:91.6667
LEAP-Seq n confirming:55
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:60

Suggested primers for confirmation by PCR

Suggested primer 1:AGCTGCAGAACATCCTGACC
Suggested primer 2:TCGTCGGATGTAGGCGATTG