Gene: Cre12.g524300
Overview
| Common name: | CGL71,PYG7 |
| Defline: | (1 of 7) 2.4.1.255 - Protein O-GlcNAc transferase / OGTase; Pale yellow green 7, a PSI assembly factor |
| Description: | Conserved TPR repeat protein related to Arabidoddpsis Pale yellow green7 and Cyanobacterial YCF37 |
| Synonyms: | g12909.t1,CGL71,Cre12.g524300.t1.1 |
| Chromosome: | chromosome 12 |
Protein Localization
A plasmid for expressing Cre12.g524300 tagged with the fluorescent protein Venus and affinity epitope 3xFLAG is available: pLM005-Cre12.g524300-Venus-3xFLAG
Imaged strain: CSI_LW10H8
Imaging conditions: Tris-Phosphate media, air, 150 uM photons/m2/s, shaking in 96-well plate; imaged after 16 hours.
Classification(s):
chloroplast/homogeneous/pyrenoid depleted
If you reference these protein localization data in a manuscript, please cite: Wang et al. 2023.
 |  |  |  |
| Venus | Chlorophyll | Bright field | Merged |
Protein-Protein Interactions
| Bait ID | Bait Name | Prey ID | Prey Name | Reference |
|---|---|---|---|---|
| Cre08.g362900 | PSBP4 | Cre12.g524300 | CGL71,PYG7 | Mackinder et al. 2017 |
| Cre16.g662600 | BST1,LCI11,LCI11C | Cre12.g524300 | CGL71,PYG7 | Mackinder et al. 2017 |
Mutant Strains
| Insertion Junction | Mutant Strain | Insertion Junction Feature | Confidence (%) | Genome Version |
|---|---|---|---|---|
| CLIP2.000068_1 | CLIP2.000068 | CDS | 80 | 6.1 |
| CLIP2.000679_1 | CLIP2.000679 | 3'UTR | 80 | 6.1 |
| CLIP2.000679_2 | CLIP2.000679 | 3'UTR | 80 | 6.1 |
| LMJ.RY0402.102477_2 | LMJ.RY0402.102477 | intron | 73 | 5.5 |
| LMJ.RY0402.153049_1 | LMJ.RY0402.153049 | 3'UTR | 95 | 5.5 |
| LMJ.RY0402.153049_2 | LMJ.RY0402.153049 | 3'UTR | 95 | 5.5 |
| LMJ.RY0402.200112_1 | LMJ.RY0402.200112 | 3'UTR | 58 | 5.5 |
| LMJ.RY0402.204426_1 | LMJ.RY0402.204426 | 3'UTR | 95 | 5.5 |
| LMJ.RY0402.204426_2 | LMJ.RY0402.204426 | 3'UTR | 95 | 5.5 |
| LMJ.RY0402.204426_3 | LMJ.RY0402.204426 | 3'UTR | 95 | 5.5 |
| LMJ.RY0402.223664_1 | LMJ.RY0402.223664 | CDS | 58 | 5.5 |
| LMJ.RY0402.227196_1 | LMJ.RY0402.227196 | intron | 73 | 5.5 |
Gene Annotations
| PFAM: | PF13414 |
| PANTHER: | PTHR26312 PTHR26312:SF66 |
| KEGG_ec: | EC:2.4.1.255 |
| KEGG_orthology: | |
| KOG: | |
| Gene ontology terms:: | GO:0005515 |
| Best arabidopsis TAIR name: | AT1G22700 |
| Best arabidopsis TAIR symbol: | |
| Best arabidopsis TAIR defline: | Tetratricopeptide repeat (TPR)-like superfamily protein |
| Phytozome Locus Page |
Phenotypes
Mutants in this gene exhibit a phenotype under the following conditions:
| Photosynthesis or light sensitivity, screen 2 of 12 ( 86% confidence (FDR = 0.14)) |
| Photosynthesis or light sensitivity, screen 6 of 12 ( 75% confidence (FDR = 0.25)) |
Note: FDR indicates the likelihood that a particular genotype-phenotype relationship is incorrect. Not all mutants in a particular gene show the same phenotype. Please see the mutant pages for each mutant's phenotypes. Complementation is needed to definitively prove a genotype-phenotype link. These data are from a pooled phenotyping experiment.
If you reference the phenotypic data above in a manuscript, please cite: Fauser et al. 2022 Nature Genetics.