Gene: Cre07.g314150
Overview
| Common name: | ZDS,ZDS1 |
| Defline: | (1 of 1) 1.3.5.6 - 9,9'-di-cis-zeta-carotene desaturase / Zeta-carotene desaturase; Zeta-carotene desaturase |
| Description: | Zeta-carotene desaturase (carotene 7,8-desaturase), chloroplast precursor. Previously annotated as ZDS |
| Synonyms: | Cre07.g314150.t1.1,ZDS,g7269.t1 |
| Chromosome: | chromosome 7 |
Protein Localization
A plasmid for expressing Cre07.g314150 tagged with the fluorescent protein Venus and affinity epitope 3xFLAG is available: pLM005-Cre07.g314150-Venus-3xFLAG
Imaged strain: CSI_LW07F8
Imaging conditions: Tris-Phosphate media, air, 150 uM photons/m2/s, shaking in 96-well plate; imaged after 16 hours.
Classification(s):
chloroplast/homogeneous/pyrenoid depleted
If you reference these protein localization data in a manuscript, please cite: Wang et al. 2023.
 |  |  |  |
| Venus | Chlorophyll | Bright field | Merged |
Protein-Protein Interactions
| Bait ID | Bait Name | Prey ID | Prey Name | Reference |
|---|---|---|---|---|
| Cre06.g278195 | CTI,CTI1 | Cre07.g314150 | ZDS,ZDS1 | Wang et al. 2023 |
| Cre14.g626700 | PETF,FDX1 | Cre07.g314150 | ZDS,ZDS1 | Mackinder et al. 2017 |
| Cre16.g662600 | BST1,LCI11,LCI11C | Cre07.g314150 | ZDS,ZDS1 | Mackinder et al. 2017 |
Mutant Strains
| Insertion Junction | Mutant Strain | Insertion Junction Feature | Confidence (%) | Genome Version |
|---|---|---|---|---|
| CLIP2.001090_1 | CLIP2.001090 | 3'UTR | 80 | 6.1 |
| CLIP2.001090_2 | CLIP2.001090 | 3'UTR | 80 | 6.1 |
| CLIP2.001365_1 | CLIP2.001365 | 3'UTR | 80 | 6.1 |
| CLIP2.002068_1 | CLIP2.002068 | 5'UTR | 80 | 6.1 |
| CLIP2.002068_2 | CLIP2.002068 | 5'UTR | 80 | 6.1 |
| CLIP2.002971_1 | CLIP2.002971 | 3'UTR | 80 | 6.1 |
| CLIP2.002971_2 | CLIP2.002971 | 3'UTR | 80 | 6.1 |
| CLIP2.003221_1 | CLIP2.003221 | 3'UTR | 63 | 6.1 |
| CLIP2.004540_1 | CLIP2.004540 | intron | 80 | 6.1 |
| CLIP2.004540_2 | CLIP2.004540 | intron | 80 | 6.1 |
| LMJ.RY0402.120223_1 | LMJ.RY0402.120223 | intron | 58 | 5.5 |
Gene Annotations
| PFAM: | PF13450 |
| PANTHER: | PTHR10742 PTHR10742:SF274 |
| KEGG_ec: | EC:1.3.5.6 |
| KEGG_orthology: | K00514 |
| KOG: | KOG0029 |
| Gene ontology terms:: | GO:0016117, GO:0016719, GO:0055114 |
| Best arabidopsis TAIR name: | AT3G04870 |
| Best arabidopsis TAIR symbol: | PDE181,SPC1,ZDS |
| Best arabidopsis TAIR defline: | zeta-carotene desaturase |
| Phytozome Locus Page |
Phenotypes
Our phenotype screens did not find statistically significant results for this gene.