Insertion junction: CLIP2.001090_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.001090
Chromosome:chromosome 7
Location:297967
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g314150 ZDS,ZDS1 (1 of 1) 1.3.5.6 - 9,9'-di-cis-zeta-carotene desaturase / Zeta-carotene desaturase; Zeta-carotene desaturase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGTGTGCGGAGGGCGGCGGCGGCGGTTCGTGTGTGACGCGGATGTCGGG
Internal bar code:TGCCGTTTGGACTGTCAACTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:2602
LEAP-Seq percent confirming:93.3333
LEAP-Seq n confirming:84
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:90

Suggested primers for confirmation by PCR

Suggested primer 1:TCCCTTCGCAGGAAAGTGAC
Suggested primer 2:CCCAACTTTTTCCTTGCGGG