Insertion junction: CLIP2.000874_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.000874
Chromosome:chromosome 16
Location:2811487
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g662600 BST1,LCI11,LCI11C (1 of 10) PF01062 - Bestrophin, RFP-TM, chloride channel (Bestrophin); Bestrophin 1 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTAACGCTGCACAAACAATTCACTCACGCTCAGGTTTCAGTCACTGGAT
Internal bar code:AAACATCCCGCGTTGTGTTTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1739
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:ACTCATCAGCCTCATCCCCT
Suggested primer 2:AAGGGCAGAACGGTTAGTGG