Insertion junction: CLIP2.000661_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.000661
Chromosome:chromosome 3
Location:5010648
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g179800 LCI24 Low-CO2-inducible membrane protein; (1 of 5) PF07466 - Protein of unknown function (DUF1517) (DUF1517) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAATAGGGGGCTCAGGTCGGTCGCCCATGCAACGCACCAGCGAGTGGTCC
Internal bar code:ATTGGTGTGTCCGACGACTGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:827
LEAP-Seq percent confirming:92.3077
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:CGTTCTTGTGCTTGTGTGCA
Suggested primer 2:CGGGTGCCAAGTTCAAACAG