Insertion junction: CLIP2.000754_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.000754
Chromosome:chromosome 10
Location:4771506
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g452800 LCIB1,PMP1,LCIB Low-CO2-inducible protein B 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCAAGAATGTTCGCTCTGTCTTCGCGCCAGACTGCTCGCTCCGCTTGCAG
Internal bar code:GCCACAGCTACTTAGCTCTTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:992
LEAP-Seq percent confirming:96.2963
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:AGGATCTGTGCGGTTCAGTG
Suggested primer 2:ATGAGGTTTGGCATGCTCGA