Insertion junction: CLIP2.000772_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.000772
Chromosome:chromosome 12
Location:3343597
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g498500 DEG1C,DEG11 (1 of 1) PF00089//PF13180 - Trypsin (Trypsin) // PDZ domain (PDZ_2); Deg protease intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGATGTGAAGACGCGGGCTTTTGTGCTTACCTTGATGACATGGTAGTTG
Internal bar code:TCACGCTTTGCGGCTCGCCAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1404
LEAP-Seq percent confirming:3.77358
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:51
LEAP-Seq n unique pos:53

Suggested primers for confirmation by PCR

Suggested primer 1:CTCCAACCCGTCCTTTCTCC
Suggested primer 2:CCAGCCCCTTGATGGTCAAT